<?xml version="1.0" encoding="UTF-8" standalone="yes"?><oembed><version><![CDATA[1.0]]></version><provider_name><![CDATA[amphoteros]]></provider_name><provider_url><![CDATA[http://amphoteros.com]]></provider_url><author_name><![CDATA[ayudin2013]]></author_name><author_url><![CDATA[https://amphoteros.com/author/ayudin2013/]]></author_url><title><![CDATA[Neighbourly ties]]></title><type><![CDATA[link]]></type><html><![CDATA[<p>In 2009, Raines and Woolfson published their influential paper on the concept of n-to-pi* interaction in proteins (<a href="http://www.nature.com/nchembio/journal/v6/n8/full/nchembio.406.html" rel="nofollow">http://www.nature.com/nchembio/journal/v6/n8/full/nchembio.406.html</a>). By analyzing the protein databank they came to the conclusion that there exists a previously unappreciated attractive interaction between backbone amides. This interaction arises from the delocalization of a lone pair of electrons (n) from an oxygen atom to the antibonding orbital (pi*) of the subsequent carbonyl group. For synthetic organic chemists this sort of interaction makes sense. Who can forget the Burgi-Dunitz trajectory of attack? However, it has gone under the radar of structural biologists, which is somewhat surprising (or not). Given the significance of this interaction, there is a push to adjust parametrization of many molecular modeling packages. There are many other implications, but what about peptide reactivity? I can think of one cool example. It comes from Kent and co-workers, who published an interesting Chem Comm paper not too long ago (<a href="http://pubs.rsc.org/en/content/articlehtml/2011/cc/c0cc04120c" rel="nofollow">http://pubs.rsc.org/en/content/articlehtml/2011/cc/c0cc04120c</a>). In it, the authors explain the relatively low reactivity of prolyl thioesters in native chemical ligation. According to Kent, the n-to-pi* interaction is playing a role in diminishing the electrophilicity of the thioester.<b>  </b></p>
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